Tools for analysing OmniLog(R) and Microstation Phenotype
Microarray (PM) data as produced by the devices distributed by
BiOLOG Inc., including plotting, aggregating (estimating curve
parameters), comparing and discretizing PM data, creating
phylogenetic formats and reports for taxonomic journals,
running multiple comparisons of means, integrating metadata,
using the YAML format for the storage of data and metadata, and
batch conversion of large numbers of files.
| Version: |
0.9.1 |
| Depends: |
R (≥ 2.14.0) |
| Imports: |
methods, lattice, parallel, boot, hwriter, plotrix, Ckmeans.1d.dp, pkgutils (≥ 0.3-0), yaml (≥ 2.1.5), splines, mgcv, grofit (≥ 1.1), rjson (≥ 0.2.12) |
| Suggests: |
optparse, gplots, opmdata (≥ 0.4-0), testthat, multcomp |
| Published: |
2013-04-18 |
| Author: |
Markus Goeker, with contributions by Lea A.I. Vaas, Benjamin
Hofner, Johannes Sikorski, Nora Buddruhs and Anne Fiebig |
| Maintainer: |
Markus Goeker <markus.goeker at dsmz.de> |
| License: |
GPL-2 | GPL-3 [expanded from: GPL (≥ 2)] |
| URL: |
http://opm.dsmz.de/ |
| NeedsCompilation: |
no |
| Citation: |
opm citation info |
| CRAN checks: |
opm results |