CRAN Package Check Results for Package BootstrapQTL

Last updated on 2020-08-13 06:47:21 CEST.

Flavor Version Tinstall Tcheck Ttotal Status Flags
r-devel-linux-x86_64-debian-clang 1.0.2 3.36 39.12 42.48 OK
r-devel-linux-x86_64-debian-gcc 1.0.2 2.49 29.75 32.24 OK
r-devel-linux-x86_64-fedora-clang 1.0.2 58.96 OK
r-devel-linux-x86_64-fedora-gcc 1.0.2 47.86 OK
r-devel-windows-ix86+x86_64 1.0.2 10.00 69.00 79.00 ERROR
r-patched-linux-x86_64 1.0.2 3.13 38.24 41.37 OK
r-patched-solaris-x86 1.0.2 71.60 OK
r-release-linux-x86_64 1.0.2 3.41 38.10 41.51 OK
r-release-macos-x86_64 1.0.2 OK
r-release-windows-ix86+x86_64 1.0.2 9.00 75.00 84.00 NOTE
r-oldrel-macos-x86_64 1.0.2 NOTE
r-oldrel-windows-ix86+x86_64 1.0.2 5.00 56.00 61.00 NOTE

Check Details

Version: 1.0.2
Check: package dependencies
Result: NOTE
    Package suggested but not available for checking: 'doMC'
Flavors: r-devel-windows-ix86+x86_64, r-release-windows-ix86+x86_64, r-oldrel-windows-ix86+x86_64

Version: 1.0.2
Check: tests
Result: ERROR
     Running 'testthat.R' [8s]
    Running the tests in 'tests/testthat.R' failed.
    Complete output:
     > library(testthat)
     > library(BootstrapQTL)
     Loading required package: MatrixEQTL
     >
     > test_check("BootstrapQTL")
     Registering 2 cores for bootstrap procedure.
     Mapping QTLs and obtaining nominal effect size estimates...
     Optimising data for bootstrap procedure...
     Running bootstrap procedure for 10 bootstraps on 2 cores.
     Removing winner's curse...
     Restoring global environment...
     Done!
     -- 1. Error: Run BootstrapQTL (@test.R#53) ------------------------------------
     cannot open the connection
     Backtrace:
     1. BootstrapQTL::BootstrapQTL(...)
     2. BootstrapQTL:::setupParallel(n_cores, verbose = TRUE, reporterCore = FALSE)
     3. parallel::makeCluster(nCores, type = "PSOCK")
     4. parallel::makePSOCKcluster(names = spec, ...)
     5. base::system(cmd, wait = FALSE, input = "")
     6. base::writeLines(input, f)
     7. base::file(con, "w")
    
     Restoring global environment...
     == testthat results ===========================================================
     [ OK: 0 | SKIPPED: 0 | WARNINGS: 3 | FAILED: 1 ]
     1. Error: Run BootstrapQTL (@test.R#53)
    
     Error: testthat unit tests failed
     Execution halted
Flavor: r-devel-windows-ix86+x86_64

Version: 1.0.2
Check: package dependencies
Result: NOTE
    Package suggested but not available for checking: ‘qvalue’
Flavor: r-oldrel-macos-x86_64

Version: 1.0.2
Check: Rd cross-references
Result: NOTE
    Package unavailable to check Rd xrefs: ‘qvalue’
Flavor: r-oldrel-macos-x86_64