Last updated on 2024-09-13 06:50:50 CEST.
| Flavor | Version | Tinstall | Tcheck | Ttotal | Status | Flags |
|---|---|---|---|---|---|---|
| r-devel-linux-x86_64-debian-clang | 0.2.0 | 7.07 | 92.27 | 99.34 | NOTE | |
| r-devel-linux-x86_64-debian-gcc | 0.2.0 | 4.43 | 69.51 | 73.94 | NOTE | |
| r-devel-linux-x86_64-fedora-clang | 0.2.0 | 166.13 | NOTE | |||
| r-devel-linux-x86_64-fedora-gcc | 0.2.0 | 166.43 | OK | |||
| r-devel-windows-x86_64 | 0.2.0 | 8.00 | 110.00 | 118.00 | NOTE | |
| r-patched-linux-x86_64 | 0.2.0 | 11.89 | 88.49 | 100.38 | OK | |
| r-release-linux-x86_64 | 0.2.0 | 5.78 | 79.03 | 84.81 | ERROR | |
| r-release-macos-arm64 | 0.2.0 | 56.00 | NOTE | |||
| r-release-macos-x86_64 | 0.2.0 | 81.00 | NOTE | |||
| r-release-windows-x86_64 | 0.2.0 | 9.00 | 111.00 | 120.00 | NOTE | |
| r-oldrel-macos-arm64 | 0.2.0 | 66.00 | NOTE | |||
| r-oldrel-macos-x86_64 | 0.2.0 | 146.00 | NOTE | |||
| r-oldrel-windows-x86_64 | 0.2.0 | 11.00 | 130.00 | 141.00 | NOTE |
Version: 0.2.0
Check: Rd cross-references
Result: NOTE
Found the following Rd file(s) with Rd \link{} targets missing package
anchors:
knitPrintListObjects.Rd: knitr
Please provide package anchors for all Rd \link{} targets not in the
package itself and the base packages.
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-windows-x86_64
Version: 0.2.0
Check: installed package size
Result: NOTE
installed size is 7.6Mb
sub-directories of 1Mb or more:
doc 6.5Mb
Flavors: r-devel-linux-x86_64-fedora-clang, r-devel-windows-x86_64, r-release-macos-arm64, r-release-macos-x86_64, r-release-windows-x86_64, r-oldrel-macos-arm64, r-oldrel-macos-x86_64, r-oldrel-windows-x86_64
Version: 0.2.0
Check: package dependencies
Result: NOTE
Package suggested but not available for checking: ‘flextable’
Flavor: r-release-linux-x86_64
Version: 0.2.0
Check: tests
Result: ERROR
Running ‘testthat.R’ [8s/9s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> library(testthat)
> library(clinUtils)
>
> test_check("clinUtils")
[ FAIL 1 | WARN 1 | SKIP 2 | PASS 289 ]
══ Skipped tests (2) ═══════════════════════════════════════════════════════════
• On CRAN (2): 'test_getClinDT.R:838:7', 'test_getClinDT.R:855:7'
══ Failed tests ════════════════════════════════════════════════════════════════
── Error ('test_knitPrintListPlots.R:10:1'): (code run outside of `test_that()`) ──
<packageNotFoundError/error/condition>
Error in `library(flextable)`: there is no package called 'flextable'
Backtrace:
▆
1. └─base::library(flextable) at test_knitPrintListPlots.R:10:1
[ FAIL 1 | WARN 1 | SKIP 2 | PASS 289 ]
Error: Test failures
Execution halted
Flavor: r-release-linux-x86_64
Version: 0.2.0
Check: re-building of vignette outputs
Result: ERROR
Error(s) in re-building vignettes:
...
--- re-building ‘clinUtils-vignette.Rmd’ using rmarkdown
** Processing: /home/hornik/tmp/scratch/RtmpPbIg14/./figures_vignette/palette-plot-1.png
1344x1536 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 57165 bytes
Input file size = 57315 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 47105
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 47105
Output IDAT size = 47105 bytes (10060 bytes decrease)
Output file size = 47183 bytes (10132 bytes = 17.68% decrease)
** Processing: /home/hornik/tmp/scratch/RtmpPbIg14/./figures_vignette/getPaletteCDISC-1.png
1344x960 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 37579 bytes
Input file size = 37705 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5 IDAT size = 34036
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 5 IDAT size = 34036
Output IDAT size = 34036 bytes (3543 bytes decrease)
Output file size = 34114 bytes (3591 bytes = 9.52% decrease)
** Processing: /home/hornik/tmp/scratch/RtmpPbIg14/./figures_vignette/getPaletteCDISC-2.png
1344x960 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 50513 bytes
Input file size = 50663 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 48374
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5 IDAT size = 46761
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 5 IDAT size = 46761
Output IDAT size = 46761 bytes (3752 bytes decrease)
Output file size = 46839 bytes (3824 bytes = 7.55% decrease)
** Processing: /home/hornik/tmp/scratch/RtmpPbIg14/./figures_vignette/palettes-1.png
1344x960 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 123840 bytes
Input file size = 124098 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 105019
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 105019
Output IDAT size = 105019 bytes (18821 bytes decrease)
Output file size = 105097 bytes (19001 bytes = 15.31% decrease)
** Processing: /home/hornik/tmp/scratch/RtmpPbIg14/./figures_vignette/lab-hist-static1-1.png
1344x768 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 55422 bytes
Input file size = 55572 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 46794
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 46794
Output IDAT size = 46794 bytes (8628 bytes decrease)
Output file size = 46872 bytes (8700 bytes = 15.66% decrease)
** Processing: /home/hornik/tmp/scratch/RtmpPbIg14/./figures_vignette/lab-hist-static2-1.png
576x768 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 33936 bytes
Input file size = 34062 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 26094
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 26094
Output IDAT size = 26094 bytes (7842 bytes decrease)
Output file size = 26172 bytes (7890 bytes = 23.16% decrease)
** Processing: /home/hornik/tmp/scratch/RtmpPbIg14/./figures_vignette/lab-hist-static3-1.png
960x768 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 44767 bytes
Input file size = 44905 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 36589
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 36589
Output IDAT size = 36589 bytes (8178 bytes decrease)
Output file size = 36667 bytes (8238 bytes = 18.35% decrease)
Quitting from lines 499-514 [table-flextable-knitPrintListObjects] (clinUtils-vignette.Rmd)
Error: processing vignette 'clinUtils-vignette.Rmd' failed with diagnostics:
there is no package called 'flextable'
--- failed re-building ‘clinUtils-vignette.Rmd’
SUMMARY: processing the following file failed:
‘clinUtils-vignette.Rmd’
Error: Vignette re-building failed.
Execution halted
Flavor: r-release-linux-x86_64