CRAN Package Check Results for Package crosstalkr

Last updated on 2023-03-20 05:52:07 CET.

Flavor Version Tinstall Tcheck Ttotal Status Flags
r-devel-linux-x86_64-debian-clang 1.0.1 OK
r-devel-linux-x86_64-debian-gcc 1.0.1 19.70 175.58 195.28 OK
r-devel-linux-x86_64-fedora-clang 1.0.1 328.31 OK
r-devel-linux-x86_64-fedora-gcc 1.0.1 239.94 ERROR
r-devel-windows-x86_64 1.0.1 54.00 299.00 353.00 OK
r-patched-linux-x86_64 1.0.1 18.13 223.03 241.16 OK
r-release-linux-x86_64 1.0.1 16.94 219.87 236.81 OK
r-release-macos-arm64 1.0.1 87.00 ERROR
r-release-macos-x86_64 1.0.1 130.00 ERROR
r-release-windows-x86_64 1.0.1 60.00 279.00 339.00 OK
r-oldrel-macos-arm64 1.0.1 113.00 OK
r-oldrel-macos-x86_64 1.0.1 137.00 ERROR
r-oldrel-windows-ix86+x86_64 1.0.1 54.00 401.00 455.00 NOTE

Check Details

Version: 1.0.1
Check: re-building of vignette outputs
Result: ERROR
    Error(s) in re-building vignettes:
    --- re-building ‘crosstalkr_vignette.Rmd’ using rmarkdown
    Quitting from lines 39-56 (crosstalkr_vignette.Rmd)
    Error: processing vignette 'crosstalkr_vignette.Rmd' failed with diagnostics:
    HTTP error 503.
    --- failed re-building ‘crosstalkr_vignette.Rmd’
    
    SUMMARY: processing the following file failed:
     ‘crosstalkr_vignette.Rmd’
    
    Error: Vignette re-building failed.
    Execution halted
Flavor: r-devel-linux-x86_64-fedora-gcc

Version: 1.0.1
Check: package dependencies
Result: NOTE
    Package suggested but not available for checking: ‘EnsDb.Hsapiens.v79’
Flavors: r-release-macos-arm64, r-release-macos-x86_64, r-oldrel-macos-x86_64

Version: 1.0.1
Check: tests
Result: ERROR
     Running ‘testthat.R’ [17s/40s]
    Running the tests in ‘tests/testthat.R’ failed.
    Last 13 lines of output:
     Error in `loadNamespace(x)`: there is no package called 'EnsDb.Hsapiens.v79'
     Backtrace:
     ▆
     1. ├─testthat::expect_equal(length(as_gene_symbol(entrez_test)), length(entrez_test)) at test-utils.R:16:2
     2. │ └─testthat::quasi_label(enquo(object), label, arg = "object")
     3. │ └─rlang::eval_bare(expr, quo_get_env(quo))
     4. ├─crosstalkr::as_gene_symbol(entrez_test)
     5. └─base::loadNamespace(x)
     6. └─base::withRestarts(stop(cond), retry_loadNamespace = function() NULL)
     7. └─base (local) withOneRestart(expr, restarts[[1L]])
     8. └─base (local) doWithOneRestart(return(expr), restart)
    
     [ FAIL 2 | WARN 2 | SKIP 8 | PASS 89 ]
     Error: Test failures
     Execution halted
Flavor: r-release-macos-arm64

Version: 1.0.1
Check: tests
Result: ERROR
     Running ‘testthat.R’ [30s/52s]
    Running the tests in ‘tests/testthat.R’ failed.
    Last 13 lines of output:
     Error in `loadNamespace(x)`: there is no package called 'EnsDb.Hsapiens.v79'
     Backtrace:
     ▆
     1. ├─testthat::expect_equal(length(as_gene_symbol(entrez_test)), length(entrez_test)) at test-utils.R:16:2
     2. │ └─testthat::quasi_label(enquo(object), label, arg = "object")
     3. │ └─rlang::eval_bare(expr, quo_get_env(quo))
     4. ├─crosstalkr::as_gene_symbol(entrez_test)
     5. └─base::loadNamespace(x)
     6. └─base::withRestarts(stop(cond), retry_loadNamespace = function() NULL)
     7. └─base (local) withOneRestart(expr, restarts[[1L]])
     8. └─base (local) doWithOneRestart(return(expr), restart)
    
     [ FAIL 2 | WARN 2 | SKIP 8 | PASS 89 ]
     Error: Test failures
     Execution halted
Flavor: r-release-macos-x86_64

Version: 1.0.1
Check: tests
Result: ERROR
     Running ‘testthat.R’ [28s/51s]
    Running the tests in ‘tests/testthat.R’ failed.
    Last 13 lines of output:
     Error in `loadNamespace(x)`: there is no package called 'EnsDb.Hsapiens.v79'
     Backtrace:
     ▆
     1. ├─testthat::expect_equal(length(as_gene_symbol(entrez_test)), length(entrez_test)) at test-utils.R:16:2
     2. │ └─testthat::quasi_label(enquo(object), label, arg = "object")
     3. │ └─rlang::eval_bare(expr, quo_get_env(quo))
     4. ├─crosstalkr::as_gene_symbol(entrez_test)
     5. └─base::loadNamespace(x)
     6. └─base::withRestarts(stop(cond), retry_loadNamespace = function() NULL)
     7. └─base (local) withOneRestart(expr, restarts[[1L]])
     8. └─base (local) doWithOneRestart(return(expr), restart)
    
     [ FAIL 2 | WARN 2 | SKIP 8 | PASS 89 ]
     Error: Test failures
     Execution halted
Flavor: r-oldrel-macos-x86_64

Version: 1.0.1
Check: dependencies in R code
Result: NOTE
    Initiating curl with CURL_SSL_BACKEND: openssl
Flavor: r-oldrel-windows-ix86+x86_64