# bmotif 2.0.2
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## Minor changes
- Addition of a reference in the package description.

# bmotif 2.0.1
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## Bug fixes
- Fixed noLD issue in unit tests that would occur when checking normalised motif frequencies sum to 1
- Added failure message to expect() unit tests to remove WARNINGS

# bmotif 2.0.0
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## New features
- New function: link_positions(). Counts the number of times each link in a network occurs in each unique link position within motifs up to 6 nodes (to quantify a link's structural role). Also has support for weighted networks by multiplying link position counts by the link weight.
- Support for weighted motif counts: mcount() now has the ability to calculate the mean weight of motifs and the standard deviation of these weights
- Support for weighted node position counts: node_positions() now has the ability to calculate a wide range of weighted node position metrics
- Added new normalisation options for all functions

## Major changes
- positions() function has been renamed node_positions() to allow node_positions and the link_positions() function to be distinguished
- Column names in node_position() function are changed from px to npx, where x is the ID of the position. This is to distinguish node positions (np) from link positions (lp) in the link_positions() functions
- mcount 'normalise' argument has been renamed 'normalistion' for consistency with node_positions()
- bmotif now requires R 3.5.0 or higher

## Minor changes
- Changed default row and column names to lower-case; added information on default row and column names to documentation; removed warning if default row and column names are assigned
- Updated README with citation, license and references section. Added links to MATLAB and Python versions
- Added Methods in Ecology and Evolution citation in CITATION file
- Some minor documentation updates to node_positions()
- Added a new author of the package
- Updated documentation for all functions

## Bug fixes
- Fixed bug where positions() (now called node_positions()) would break for 1 x 1 matrices when using 'sum' or 'size class' normalisation
- Added check to prevent the use of a matrix with duplicate row or column names in node_positions() or link_positions() as this would break these functions

# bmotif 1.0.0
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- mcount() counts the number of motifs up to 6 nodes in a bipartite network.
- positions() counts the number of times each node in a bipartite network occurs in each unique position in each of the motifs up to 6 nodes.