knitr: A General-Purpose Package for Dynamic Report Generation in R

Provides a general-purpose tool for dynamic report generation in R using Literate Programming techniques.

Version: 1.45
Depends: R (≥ 3.3.0)
Imports: evaluate (≥ 0.15), highr, methods, tools, xfun (≥ 0.39), yaml (≥ 2.1.19)
Suggests: bslib, codetools, DBI (≥ 0.4-1), digest, formatR, gifski, gridSVG, htmlwidgets (≥ 0.7), curl, jpeg, JuliaCall (≥ 0.11.1), magick, markdown (≥ 1.3), png, ragg, reticulate (≥ 1.4), rgl (≥ 0.95.1201), rlang, rmarkdown, sass, showtext, styler (≥ 1.2.0), targets (≥ 0.6.0), testit, tibble, tikzDevice (≥ 0.10), tinytex (≥ 0.46), webshot, rstudioapi, svglite, xml2 (≥ 1.2.0)
Published: 2023-10-30
Author: Yihui Xie ORCID iD [aut, cre], Abhraneel Sarma [ctb], Adam Vogt [ctb], Alastair Andrew [ctb], Alex Zvoleff [ctb], Amar Al-Zubaidi [ctb], Andre Simon [ctb] (the CSS files under inst/themes/ were derived from the Highlight package http://www.andre-simon.de), Aron Atkins [ctb], Aaron Wolen [ctb], Ashley Manton [ctb], Atsushi Yasumoto ORCID iD [ctb], Ben Baumer [ctb], Brian Diggs [ctb], Brian Zhang [ctb], Bulat Yapparov [ctb], Cassio Pereira [ctb], Christophe Dervieux [ctb], David Hall [ctb], David Hugh-Jones [ctb], David Robinson [ctb], Doug Hemken [ctb], Duncan Murdoch [ctb], Elio Campitelli [ctb], Ellis Hughes [ctb], Emily Riederer [ctb], Fabian Hirschmann [ctb], Fitch Simeon [ctb], Forest Fang [ctb], Frank E Harrell Jr [ctb] (the Sweavel package at inst/misc/Sweavel.sty), Garrick Aden-Buie [ctb], Gregoire Detrez [ctb], Hadley Wickham [ctb], Hao Zhu [ctb], Heewon Jeon [ctb], Henrik Bengtsson [ctb], Hiroaki Yutani [ctb], Ian Lyttle [ctb], Hodges Daniel [ctb], Jacob Bien [ctb], Jake Burkhead [ctb], James Manton [ctb], Jared Lander [ctb], Jason Punyon [ctb], Javier Luraschi [ctb], Jeff Arnold [ctb], Jenny Bryan [ctb], Jeremy Ashkenas [ctb, cph] (the CSS file at inst/misc/docco-classic.css), Jeremy Stephens [ctb], Jim Hester [ctb], Joe Cheng [ctb], Johannes Ranke [ctb], John Honaker [ctb], John Muschelli [ctb], Jonathan Keane [ctb], JJ Allaire [ctb], Johan Toloe [ctb], Jonathan Sidi [ctb], Joseph Larmarange [ctb], Julien Barnier [ctb], Kaiyin Zhong [ctb], Kamil Slowikowski [ctb], Karl Forner [ctb], Kevin K. Smith [ctb], Kirill Mueller [ctb], Kohske Takahashi [ctb], Lorenz Walthert [ctb], Lucas Gallindo [ctb], Marius Hofert [ctb], Martin ModrĂ¡k [ctb], Michael Chirico [ctb], Michael Friendly [ctb], Michal Bojanowski [ctb], Michel Kuhlmann [ctb], Miller Patrick [ctb], Nacho Caballero [ctb], Nick Salkowski [ctb], Niels Richard Hansen [ctb], Noam Ross [ctb], Obada Mahdi [ctb], Pavel N. Krivitsky ORCID iD [ctb], Pedro Faria [ctb], Qiang Li [ctb], Ramnath Vaidyanathan [ctb], Richard Cotton [ctb], Robert Krzyzanowski [ctb], Rodrigo Copetti [ctb], Romain Francois [ctb], Ruaridh Williamson [ctb], Sagiru Mati ORCID iD [ctb], Scott Kostyshak [ctb], Sebastian Meyer [ctb], Sietse Brouwer [ctb], Simon de Bernard [ctb], Sylvain Rousseau [ctb], Taiyun Wei [ctb], Thibaut Assus [ctb], Thibaut Lamadon [ctb], Thomas Leeper [ctb], Tim Mastny [ctb], Tom Torsney-Weir [ctb], Trevor Davis [ctb], Viktoras Veitas [ctb], Weicheng Zhu [ctb], Wush Wu [ctb], Zachary Foster [ctb], Zhian N. Kamvar ORCID iD [ctb], Posit Software, PBC [cph, fnd]
Maintainer: Yihui Xie <xie at yihui.name>
BugReports: https://github.com/yihui/knitr/issues
License: GPL-2 | GPL-3 [expanded from: GPL]
URL: https://yihui.org/knitr/
NeedsCompilation: no
SystemRequirements: Package vignettes based on R Markdown v2 or reStructuredText require Pandoc (http://pandoc.org). The function rst2pdf() requires rst2pdf (https://github.com/rst2pdf/rst2pdf).
Citation: knitr citation info
Materials: NEWS
In views: ReproducibleResearch
CRAN checks: knitr results

Documentation:

Reference manual: knitr.pdf
Vignettes: Custom Print Methods
Not an Introduction to knitr
knitr Reference Card
Display Tables with the JavaScript Library DataTables
Templating with knit_expand()
An R HTML Vignette with knitr
An R Markdown Vignette with knitr
R Markdown with the Docco Classic Style
R Markdown with the Docco Linear Style

Downloads:

Package source: knitr_1.45.tar.gz
Windows binaries: r-devel: knitr_1.45.zip, r-release: knitr_1.45.zip, r-oldrel: knitr_1.45.zip
macOS binaries: r-release (arm64): knitr_1.45.tgz, r-oldrel (arm64): knitr_1.45.tgz, r-release (x86_64): knitr_1.45.tgz
Old sources: knitr archive

Reverse dependencies:

Reverse depends: basecallQC, BoneProfileR, CNORode, cTOST, DeMixT, docknitr, FAMetA, frequency, frequencyConnectedness, Guitar, knitxl, LabRS, mathml, multiverse, NatureSounds, PopGenReport, preferably, qra, ReportingTools, reverseR, rmdHelpers, ROCpAI, rrecsys, sangeranalyseR, spThin, tab, tangram, tidycharts, tufterhandout, xtsum
Reverse imports: abseqR, accessrmd, actel, actuaRE, ADAM, ADAMgui, adea, AdhereRViz, ADPclust, AgroR, ahpsurvey, alpha.correction.bh, amanida, AMARETTO, amplican, Anaquin, animint2, APCtools, apsimx, archeoViz, archetyper, arsenal, artpack, AssetCorr, ASSISTant, attachment, autoharp, automagic, autoMrP, AutoScore, bandle, BatchQC, baytrends, BCHM, bcrm, behaviorchange, BENMMI, BGVAR, binb, BiocCheck, BiocStyle, BiocWorkflowTools, BioInsight, BioNetStat, bipl5, blandr, BLCOP, blogdown, bookdown, boot.heterogeneity, bpmnR, BrailleR, brainKCCA, businessPlanR, CALANGO, ccostr, CEMiTool, ceterisParibus, cheese, chicane, chronicle, chunkhooks, cleaner, clinDataReview, clinUtils, ClustImpute, codaredistlm, codebook, codified, cola, compareGroups, COMPASS, compcodeR, condformat, condir, confidence, conflr, corrgrapher, corto, countries, covid19tunisia, cpsurvsim, crsra, CTSV, cystiSim, dabr, dagirlite, DAPAR, data.validator, dataCompareR, dbglm, DCEtool, DEGreport, DeltaMAN, dematel, dendroTools, DescrTab2, details, DImodelsMulti, DiscoRhythm, distill, dlookr, DmelSGI, dogesr, dosedesignR, DQAgui, DQAstats, dupNodes, DynareR, earlywarnings, ecr, eHDPrep, encryptr, ENMTools, envirem, epifitter, epitab, epitweetr, epoxy, ergm, esATAC, esmtools, estadistica, EviewsR, exams, exams2learnr, ezknitr, facerec, FFTrees, FishPhyloMaker, fitPS, flexdashboard, flexsiteboard, flextable, flipbookr, flowAI, flowBeads, flowPloidy, flying, FlyingR, forestRK, formattable, funGp, funspotr, furniture, genogeographer, GEOexplorer, getable, ggPMX, ggtibble, gistr, gitdown, glossary, glossr, gm, Gmisc, grapesAgri1, grateful, Greg, gretlR, gtExtras, gtsummary, GWASinspector, gWQS, HaploCatcher, HGraph, Hmisc, HMP16SData, HMP2Data, hoardeR, hoodscanR, hR, hrbrthemes, htmlTable, htmlwidgets, ICED, iCellR, ideal, igate, iheatmapr, imgrec, INSPECTumours, IntramiRExploreR, intRinsic, IOHanalyzer, iotables, iraceplot, ivdesc, JSmediation, juicedown, JuliaCall, kableExtra, kfa, kfigr, kinship2, knitLatex, knitrBootstrap, knitrdata, learnr, lemon, lessR, levi, lfmm, lifeR, liftr, lightparser, lillies, LineagePulse, lingglosses, linguisticsdown, linl, lintr, lipidomeR, lorem, LorenzRegression, lrd, LTASR, madshapR, manipulateWidget, marked, MBNMAtime, memor, MendelianRandomization, meshr, MetaIntegration, MetaLandSim, metapower, metathis, mgwrsar, microbiomeExplorer, microsamplingDesign, micsr, midasHLA, minidown, mitch, Mmcsd, MobileTrigger, moderndive, modest, mosaicModel, MQmetrics, MRZero, MultBiplotR, multisensi, MVNtestchar, MXM, NACHO, nanotatoR, ncappc, netSEM, neuronorm, nlive, nlmixr2est, nlmixr2extra, nlraa, occumb, officedown, omicplotR, opencpu, OpenStats, oppti, Orcs, ORION, orloca, oRus, ottrpal, PAMpal, panelvar, papaja, pathfindR, PathoStat, patientProfilesVis, pcaExplorer, PFIM, phase1PRMD, PhenStat, PheVis, pinp, PINstimation, pipeComp, pixiedust, pkgnet, Platypus, plumbertableau, plume, pmxpartab, pointblank, polmineR, polymapR, polyqtlR, PoPdesign, PreKnitPostHTMLRender, prettyglm, printr, pRoloc, Prostar, protGear, PTXQC, pysd2r, qbld, qcmetrics, qmethod, qPLEXdata, qpNCA, qreport, QurvE, qwraps2, rADA, radiant.data, RagGrid, rAmCharts, rasciidoc, rcarbon, RCAS, rchallenge, RclusTool, RCPA3, Rd2md, rdtLite, rebook, regioncode, regionReport, regmed, remedy, REPLesentR, reportfactory, reportRmd, reprex, Revticulate, rgl, rgoogleclassroom, RiboCrypt, rim, RITAN, rjdmarkdown, rleafmap, RLumShiny, rmarkdown, RmdConcord, rmdformats, rmdpartials, rmdwc, rms, rmsb, rmzqc, rnmamod, ROC, rosetta, roxygen2, rpact, rphylopic, Rqc, rsf, rsimsum, RTCGA, rtemps, rTG, rticles, RTLknitr, rxode2parse, SafeVote, SASmarkdown, SBGNview, SBGNview.data, scan, scider, scientific, scifer, scmeth, scoringRules, SCRIP, scTensor, scTGIF, sdcTable, sdtmval, SEIRfansy, seminr, SemNetDictionaries, shinyalert, shinydrive, shinyobjects, shinyr, simaerep, sjPlot, sketchy, skimr, smallsets, smartDesign, SNSequate, spathial, SpatialfdaR, SPB, spelling, spiro, SpTe2M, SSIMmap, stabiliser, Statamarkdown, statgenGxE, statgenSTA, stationery, stats4teaching, Statsomat, statsr, statVisual, stranslate, struct, survMisc, svSweave, SynDI, table1, tablerDash, tables, targets, TCGAbiolinks, tci, teal.reporter, testcorr, TestGardener, texPreview, text2speech, TGST, tidydatatutor, tidypredict, tint, TnT, tpfp, TPP, trelliscopejs, ttt, tufte, twoxtwo, ubiquity, ufs, umx, UPG, upstartr, URooTab, usedthese, vcpen, VDSM, VicmapR, vidger, visR, visxhclust, vitae, voiceR, volker, vote, vtable, warbleR, webexercises, workflowr, wrappedtools, wrProteo, xaringan, xaringanExtra, yamlet
Reverse suggests: a4Classif, a4Core, a4Preproc, a4Reporting, AalenJohansen, ABACUS, ABC.RAP, abess, ABHgenotypeR, abmR, absorber, abstr, abstractr, AcademicThemes, academictwitteR, accelerometry, accessibility, accrualPlot, ACE, ace2fastq, ACEsimFit, ACEt, Achilles, acnr, act, ActFrag, activAnalyzer, activatr, ActivePathways, ActivityIndex, actLifer, actuaryr, actxps, adaptDiag, AdaptGauss, adaptiveGPCA, adaptIVPT, adaptMT, adaptr, adaR, AdaSampling, add2ggplot, addinsOutline, additive, additivityTests, addScales, adductData, adductomicsR, adegraphics, adepro, adept, adespatial, adestr, adfExplorer, adformR, AdhereR, ADImpute, adjclust, adjustedCurves, admiral, admiral.test, admiraldev, admiralonco, admiralophtha, admiralvaccine, admix, admixr, admmDensestSubmatrix, ADMMsigma, admtools, ADMUR, adnuts, adobeanalyticsr, adpss, AdvancedBasketballStats, adventr, adverSCarial, adw, aeddo, aedseo, AeRobiology, AeroSampleR, afdx, afex, affinity, AffiXcan, affycoretools, afpt, AFR, afttest, ag5Tools, agena.ai, ageutils, agfh, aggregateBioVar, aggTrees, AGHmatrix, aglm, agricolaeplotr, agridat, agriutilities, agriwater, ags, agua, AHEnsDbs, AHLRBaseDbs, AHM, AHMassBank, AHMeSHDbs, ahMLE, ahnr, AHPathbankDbs, AHPtools, ahptopsis2n, AHPubMedDbs, AHPWR, AHWikipathwaysDbs, aIc, aides, aifeducation, aihuman, aion, AIPW, aire.zmvm, airGR, airGRdatassim, airGRiwrm, airGRteaching, AirMonitor, airpart, airportr, airqualityES, airr, airt, airway, ajv, akc, alabaster, alabaster.base, alabaster.bumpy, alabaster.files, alabaster.mae, alabaster.matrix, alabaster.ranges, alabaster.sce, alabaster.schemas, alabaster.se, alabaster.spatial, alabaster.string, alabaster.vcf, alakazam, ALDEx2, aldvmm, ale, alevinQC, alfr, alfred, algo, algorithmia, alkahest, allcontributors, alleHap, AllelicImbalance, AllelicSeries, allestimates, allMT, allofus, allometric, Allspice, alluvial, almanac, alookr, alpaca, AlphaBeta, alphabetr, alphaci, AlphaMissense.v2023.hg19, AlphaMissense.v2023.hg38, alphaN, AlphaPart, AlphaSimR, alphavantager, AlpsNMR, altair, altdoc, ALUES, amanpg, amapGeocode, amapro, AMAPVox, AMARETTO, amazonadsR, amazons3R, amazonspR, ambit, AMCTestmakeR, Amelia, amelie, amen, amerifluxr, ammistability, AMModels, AMOUNTAIN, amp, ampir, AMPLE, AMR, amt, anabel, AnaCoDa, analogsea, AnalysisLin, analyzer, AnanseSeurat, AncestryMapper, AnchorRegression, ANCOMBC, and, andrews, Andromeda, andurinha, AneuFinder, ANF, AnglerCreelSurveySimulation, anim.plots, animalcules, animate, animbook, anipaths, anndata, AnnoProbe, annotater, AnnotationBustR, AnnotationDbi, AnnotationFilter, AnnotationForge, AnnotationHub, AnnotationHubData, annotatr, ANOFA, ANOM, anomalize, anota2seq, anovir, anscombiser, antaresEditObject, antaresProcessing, antaresRead, antaresViz, AnthropMMD, Anthropometry, anticlust, antitrust, AnVIL, AnVILBilling, AnVILPublish, AnVILWorkflow, anyLib, ao, aoos, aopdata, aorsf, AOV1R, apa, apache.sedona, APackOfTheClones, APAlyzer, apaTables, APCalign, apcf, apcluster, aPEAR, apeglm, apex, apexcharter, aphid, aphylo, api2lm, apisensr, APL, aplore3, apmx, Apoderoides, apollo, appeears, appleadsR, appler, applicable, appsflyeR, apyramid, aqp, AquaBEHER, AQuadtree, AquaticLifeHistory, arcgeocoder, ArchaeoChron, ArchaeoPhases, archeofrag, archetypal, archivist, archivist.github, arcpullr, arcpy, arctools, ards, areal, arealDB, arena2r, arenar, arf, argoFloats, argonR, ARGOS, argparse, ari, ARIbrain, arkdb, armspp, ARPobservation, arrangements, arrayQualityMetrics, arrow, artMS, ARTofR, ARTool, aRxiv, ASAFE, ascii, asciicast, asciiSetupReader, ascotraceR, ashapesampler, AshkenazimSonChr21, ashr, ASICS, ASICSdata, askgpt, ASMap, asmbPLS, aspi, aspline, aSPU, ASRgenomics, assertable, assertions, assertr, assessor, AssessORF, AssessORFData, ASSET, AssetAllocation, ASSIGN, assignPOP, assignR, AssocBin, ast2ast, asteRisk, ASURAT, asus, asymmetry, asymptor, async, atable, ATACCoGAPS, ATACseqQC, ATACseqTFEA, ATbounds, atena, AtlasMaker, ATNr, atpolR, atrrr, atSNP, attempt, attention, attrib, AUCell, auctestr, auctionr, audiometry, auditor, augmentedRCBD, auk, aum, ausplotsR, AustralianPoliticians, AUtests, auth0, auto.pca, autocart, AutoDeskR, autoFC, autoGO, autohrf, autoimage, autonewsmd, autonomics, autoplotly, autoRasch, autoReg, autoScorecard, autostsm, autothresholdr, autoTS, avar, AvInertia, aVirtualTwins, avocado, aweek, aweSOM, AWFisher, awinR, aws.alexa, aws.ecx, aws.wrfsmn, awst, azlogr, AzureAuth, AzureCognitive, AzureContainers, AzureCosmosR, AzureGraph, AzureKeyVault, AzureKusto, azuremlsdk, AzureQstor, AzureRMR, AzureStor, AzureTableStor, AzureVision, AzureVM, BaalChIP, babelgene, babelmixr2, babsim.hospital, babynamesIL, backbone, backpipe, backShift, bacon, bacondecomp, baffle, baggr, bain, bakeoff, baker, bakR, baldur, Ball, ballgown, BALLI, bama, bambu, bamlss, bamm, bamp, bamsignals, banditpam, BANDITS, bang, bangladesh, bannerCommenter, banocc, BANOVA, BAR, baRcodeR, barcodetrackR, bark, BART, bartcs, baRulho, BAS, base.rms, base64url, baseballr, basedosdados, basemodels, BaseSet, BASiCS, BASiCStan, BasicSTARRseq, basictabler, basilisk, basilisk.utils, BASiNET, BASiNETEntropy, basket, batata, batchelor, BatchGetSymbols, batchmix, batchtma, batchtools, bate, BAwiR, bayclumpr, bayes4psy, bayesAB, bayesanova, bayesassurance, bayesbr, BayesCombo, bayesCT, bayesdfa, BayesDLMfMRI, bayesDP, BayesESS, BayesFactor, BayesfMRI, bayesforecast, BayesGmed, BayesGOF, BayesGrowth, bayesian, BayesianMCPMod, BayesianMediationA, BayesianNetwork, BayesianPlatformDesignTimeTrend, BayesianPower, BayesianReasoning, BayesianTools, bayesianVARs, bayesImageS, bayeslm, BayesLN, bayesm, BayesMallows, BayesMassBal, bayesmeta, bayesmlogit, bayesmove, bayesnec, bayesplay, bayesplot, bayesPO, BayesPostEst, BayesPPD, BayesPPDSurv, bayesRecon, Bayesrel, bayesrules, BayesSampling, BayesSpace, BayesSUR, BayesSurvival, bayestestR, BayesTools, BayesVarSel, bayfoxr, baymedr, bayNorm, bazar, bbknnR, bbmix, bbmle, bbotk, bbreg, bbw, bcaboot, BCClong, BCDAG, bcdata, BCEA, bcf, Bchron, BClustLonG, bcmaps, bcpa, bcROCsurface, bcSeq, BCSub, bdc, BDgraph, bdl, bdlp, bdots, BDP2, bdpar, bdrc, bdscale, beachmat, beachmat.hdf5, beadarray, BeadDataPackR, beadplexr, BeadSorted.Saliva.EPIC, beakr, beanz, BEARscc, beastier, beautier, BEclear, BED, bedr, BeeBDC, BeeGUTS, beer, beezdemand, behavr, belg, bellreg, benchdamic, benchmarkfdrData2019, benchmarkme, bennu, benthos, Bernadette, berryFunctions, besthr, bestNormalize, BESTree, bestridge, betaclust, betaDelta, betaMC, betaNB, BetaPASS, betaSandwich, BETS, BeviMed, BFF, BFpack, bfw, BG2, BgeeCall, BgeeDB, BGGM, bggum, BGmisc, bgms, BGPhazard, bgw, bhmbasket, BHMSMAfMRI, BHSBVAR, BHTSpack, bib2df, bibliometrix, biblionetwork, BiCausality, biClassify, biclustermd, BICORN, bidask, BiDimRegression, BIEN, bife, BiFET, bifurcatingr, BIGDAWG, bigDM, bigergm, BIGL, biglasso, bigleaf, bigMap, bignum, bigQF, bigstep, BigVAR, billboarder, BinarybalancedCut, BinaryDosage, binaryMM, BindingSiteFinder, binfunest, bingadsR, binGroup2, binman, BinMat, binomialRF, binovisualfields, BinSegBstrap, binsegRcpp, BINtools, bio3d, bioacoustics, bioassayR, bioassays, Biobase, biobroom, biobtreeR, bioC.logs, bioCancer, BioCartaImage, BiocBaseUtils, BiocBook, BiocFHIR, BiocFileCache, BiocHail, BiocHubsShiny, BiocIO, BioCircos, BiocManager, BiocNeighbors, biocompute, BiocOncoTK, BioCor, BiocParallel, BiocPkgTools, BiocSet, BiocSingular, BiocSklearn, biocthis, biocViews, biodb, biodbChebi, biodbExpasy, biodbHmdb, biodbKegg, biodbLipidmaps, biodbMirbase, biodbNcbi, biodbNci, biodbUniprot, biodosetools, biogas, biogram, biogrowth, Bioi, BioImageDbs, bioimagetools, bioinactivation, biomaRt, BioMartGOGeneSets, biomartr, BIOMASS, biometryassist, biomformat, biomod2, BioNAR, BioNERO, BioPlex, BioQC, bioRad, bioregion, BioRssay, biosampleR, biosensors.usc, bioseq, biosigner, bioSNR, Biostatistics, Biostrings, biotic, BioTIP, biotmle, biotools, BioVenn, bipartite, bipartiteD3, bipd, biplotEZ, birdscanR, biscale, biscuiteer, biscuiteerData, BisqueRNA, bistablehistory, bit, bitmexr, BivRec, biwavelet, bizdays, bkmrhat, BKTR, blackmarbler, blacksheepr, blaise, BlandAltmanLeh, blapsr, blastula, blima, blindreview, blink, bliss, BlockCov, blockCV, blocklength, BloodCancerMultiOmics2017, BloodGen3Module, blorr, BLPestimatoR, bluebike, bluster, bmass, bmggum, bmlm, BMRBr, bmscstan, bmstdr, bnbc, bndovb, bnem, bnma, bnmonitor, BNPdensity, bnpsd, BNrich, bnstruct, BOBaFIT, bodenmiller, bodymapRat, BOJ, BoltzMM, bonsai, boostingDEA, bootCT, bootf2, bootGOF, bootPLS, bootUR, bootwar, borealis, borrowr, BOSO, BoSSA, BOSSreg, BoundaryStats, boundingbox, BoutrosLab.plotting.general, box, boxfilter, boxly, boxr, bp, bpa, bpbounds, bpnreg, bpp, BPRMeth, BRACE, bracer, brada, brainflowprobes, BranchGLM, branchpointer, BRDT, BREADR, breakaway, breakDown, breakfast, breakpointR, breakpointRdata, breathtestcore, breathteststan, brendaDb, BRETIGEA, brgedata, BRGenomics, brglm2, brickset, BridgeDbR, bridgedist, bridgesampling, brinton, brisk, brm, brms, brms.mmrm, brmsmargins, BrokenAdaptiveRidge, brokenstick, broom, broom.helpers, broom.mixed, brotli, BrowserViz, brunnermunzel, BRVM, bs4cards, bs4Dash, bscui, BSgenomeForge, bSi, bSims, bsitar, bslib, BSPBSS, bsplus, bsseq, bssm, BSSoverSpace, bst, bstrl, bsub, BSW, BT, btb, BTYD, BTYDplus, bubbleHeatmap, BubbleTree, bubblyr, bugsigdbr, buildmer, buildr, bulkAnalyseR, bulkreadr, bulletcp, bumbl, bumblebee, BUMHMM, BumpyMatrix, bunching, bunchr, bundle, bupaverse, burnr, BUScorrect, busdater, BUSpaRse, BUSseq, butcher, bvartools, bvhar, bwsTools, bytescircle, c2c, c2z, c3, C50, CACIMAR, cadd.v1.6.hg19, cadd.v1.6.hg38, CaDrA, CAEN, caesar, CAGEfightR, cageminer, CAGEr, CAISEr, calculus, calendar, calibmsm, calibrar, CalibrationCurves, calidad, callsync, calm, calpassapi, camcorder, campaignmanageR, campfin, campsis, campsismod, camsRad, camtrapR, canadamaps, canadianmaps, canaper, cancensus, canceR, CancerEvolutionVisualization, cancerscreening, candisc, Canek, canprot, cansim, canvasXpress, cape, caper, capitalR, capl, captr, car, caracas, caRamel, carbonate, carbondate, card, cardelino, Cardinal, CardinalIO, CardinalWorkflows, care4cmodel, caRecall, careless, caret, caretEnsemble, caretForecast, CARlasso, CARNIVAL, caROC, carpenter, cartograflow, cartographer, cartography, casabourse, Cascade, cascsim, casebase, CaseBasedReasoning, cases, casino, CASMAP, cassandRa, cassowaryr, CAST, cat2cat, catalog, CATALYST, CatastRo, catdata, cate, categoryCompare, cati, catmap, catmaply, cats, catsim, cauphy, causact, causal.decomp, causalBatch, causalCmprsk, causaldrf, CausalGPS, CausalImpact, CausalMBSTS, causaloptim, causalOT, CausalQueries, CausalR, causalsens, causalSLSE, CB2, cbaf, cbcTools, CBEA, cBioPortalData, cbioportalR, CBNplot, cbpManager, cbsodataR, CCAMLRGIS, ccaPP, ccfindR, ccImpute, ccmap, ccmEstimator, ccoptimalmatch, CCPlotR, ccpsyc, ccRemover, ccrepe, cdata, CDatanet, cder, cdfquantreg, CDI, CDMConnector, cdparcoord, CEDA, celaref, celarefData, celda, CellaRepertorium, CellBarcode, cellbaseR, CellBench, celldex, CelliD, cellity, cellKey, cellmigRation, CellMixS, CellNOptR, cellpypes, cellranger, cellscape, CellScore, celltrackR, CellTrails, cellWise, cellxgenedp, cencrne, censcyt, censo2017, censobr, Census2016, censusapi, censusr, CEOdata, Cepo, cequre, ceRNAnetsim, ceRtainty, Certara.R, ceser, cesR, cetcolor, CeTF, CexoR, CFAcoop, cfda, cfdnakit, cfDNAPro, cffr, cfr, cft, CFtime, cfTools, cfToolsData, CGGP, cgmquantify, CGNM, CGPfunctions, ChainLadder, chameleon, ChAMP, chandwich, changepoints, ChangePointTaylor, changeRangeR, chantrics, charlatan, chatAI4R, checkdown, checkhelper, checkmate, checkpoint, checkthat, cheem, chem16S, chemCal, chemdeg, ChemmineDrugs, ChemmineOB, ChemmineR, chemmodlab, chemodiv, ChemoSpec, ChemoSpec2D, chess, chessboard, chest, CHETAH, chevron, Chicago, chihaya, childesr, chilemapas, chillR, chimeraviz, ChIPanalyser, 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rprojroot, rprojtree, RProtoBufLib, rpsftm, rptR, rpx, RPyGeo, rqdatatable, RQEntangle, rqPen, rqt, rquery, Rraven, rrefine, rrMixture, RRMLRfMC, rroad, RRphylo, RRPP, rrr, RRreg, RRRR, rrscale, rrtable, RRTCS, rrvgo, rsae, rSAFE, RSAGA, rsample, Rsampling, Rsamtools, rsat, rsatscan, rscc, RScelestial, rsconnect, rscopus, rscorecard, rScudo, RSDA, rsdmx, rSEA, RSelenium, rsemmed, RSentiment, RSeqAn, rsetse, rsi, rsinaica, rslurm, rsmatch, rsmatrix, rsolr, RSP, Rspc, rSPDE, RSpectra, rsppfp, RSQL, RSQLite, RSqlParser, RSSthemes, rstac, rstan, rstanarm, rstanemax, rstantools, rstatix, rstiefel, rstudioapi, rsurveycto, rsvddpd, rsvg, rSWeeP, rsyncrosim, rt, rtables, RTCC, RTCGA.clinical, RTCGA.CNV, RTCGA.methylation, RTCGA.miRNASeq, RTCGA.mRNA, RTCGA.mutations, RTCGA.PANCAN12, RTCGA.rnaseq, RTCGA.RPPA, RTCGAToolbox, rTCRBCRr, rtdists, rTensor2, rticulate, rtiddlywiki, rties, RTIGER, rtika, RTMB, rtmpt, RTN, RTNduals, RTNsurvival, rtodoist, rtoot, rTorch, rTPC, Rtpca, Rtrack, 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SamplingStrata, SAMprior, SAMtool, samurais, SanFranBeachWater, sangerseqR, SangerTools, sanityTracker, sanketphonetictranslator, sankeywheel, SANTA, santaR, santoku, sanzo, saotd, sapevom, sapfluxnetr, sara4r, SARC, sarp.snowprofile, sarp.snowprofile.alignment, sars, sarsop, sasfunclust, sasr, sass, sassy, satdad, satellite, satres, satuRn, SAVER, savvyr, sBIC, SBICgraph, sbl, sbm, SBMSplitMerge, sbo, sbtools, sbw, SC.MEB, SC2API, SC3, scaffolder, ScaledMatrix, scalpel, scanMiR, scanMiRApp, scanMiRData, scAnnotatR, scAnnotatR.models, scanstatistics, SCANVIS, scaper, scapesClassification, scapGNN, scaRabee, SCArray, SCArray.sat, scATAC.Explorer, scater, scatterD3, scatterHatch, scattermore, scatterpie, scatterPlotMatrix, scBFA, SCBN, scBSP, scBubbletree, scbursts, scCATCH, scCB2, scClassify, sccomp, scCustomize, scDataviz, SCDB, scDblFinder, scDD, scDDboost, scde, scDesign3, scDHA, scdhlm, scDiffCom, scDIFtest, scds, scellpam, SCEM, scenes, SCEnt, SCFA, scFeatureFilter, scFeatures, 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simsurv, SimSurvey, simtimer, simTool, simtrait, simtrial, simts, simulator, sinaplot, sincell, sinew, singcar, single, Single.mTEC.Transcriptomes, SingleCaseES, SingleCellExperiment, singleCellHaystack, SingleCellMultiModal, SingleCellSignalR, singleCellTK, SingleMoleculeFootprinting, SingleMoleculeFootprintingData, SingleR, singleRcapture, singR, singscore, SiPhyNetwork, siplab, SIPmg, SiPSiC, SIRthresholded, sitadela, sitar, sitePath, sitepickR, siteymlgen, SITH, sitmo, sitree, sivs, sizeMat, sjlabelled, sjmisc, sjSDM, sjtable2df, skater, skedastic, skellam, sketch, sketcher, sketching, skewr, skm, skylight, skynet, skyscapeR, slackr, slalom, slanter, slasso, SleepCycles, sleepr, sleev, SLEMI, slendr, Sleuth2, Sleuth3, slgf, slickR, SLIDE, slider, slim, slingshot, slippymath, SLOPE, slouch, slowraker, slurmR, smacof, smacpod, SMAD, SmallCountRounding, SMARTbayesR, SmartEDA, SmartMeterAnalytics, smartsheetr, smartsizer, SmCCNet, smcfcs, smcryptoR, smd, smdi, SMDIC, smerc, SMFilter, 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SPARRAfairness, sparrow, SparseArray, SparseDC, sparseDFM, sparseEigen, SparseFunClust, sparsegl, sparseHessianFD, sparseIndexTracking, sparseMatrixStats, SparseMDC, SPARSEMODr, SparseMSE, sparseMVN, sparsenetgls, sparseR, sparseSEM, SparseSignatures, sparsevar, SparseVFC, sparta, SPARTAAS, sparvaride, SPAS, spaSim, spatgeom, SpatGRID, SpatialBSS, SpatialCPie, SpatialDatasets, SpatialDDLS, spatialDE, SpatialDecon, spatialDmelxsim, SpatialEpi, SpatialExperiment, SpatialFeatureExperiment, SpatialGEV, spatialHeatmap, spatialising, SpatialKDE, spatialLIBD, SpatialOmicsOverlay, SpatialPOP, SpatialPosition, SpatialRDD, spatialreg, spatialrisk, spatialsample, spatialTIME, spatialwidget, SpaTopic, SpatPCA, spatsoc, spatzie, spBFA, spcadjust, SPCompute, spcosa, spCP, spdep, spdesign, spduration, spdynmod, speakr, speaq, specieschrom, SPECK, speckle, specklestar, specL, specr, spectacles, spectator, spectr, Spectra, spectralAnalysis, spectralGraphTopology, SpectralTAD, spectre, spectrolab, 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stapler, StarBioTrek, staRdom, starm, starnet, starry, stars, starschemar, starsExtra, starsTileServer, starter, statar, statcanR, STATegRa, StateLevelForest, states, statespacer, statgenGWAS, statgenHTP, statgenIBD, statgenMPP, statgenQTLxT, Statial, statip, statnipokladna, statquotes, stats19, statsExpressions, statTarget, STdeconvolve, stdmod, stelfi, StemAnalysis, stemmatology, stenR, STEPCAM, stepgbm, StepGWR, SteppedPower, stepR, StepReg, steprf, steps, stevedata, stevedore, stevemisc, STexampleData, sticky, SticsRFiles, stim, stJoincount, stminsights, StMoMo, STMotif, stochLAB, stochvol, stochvolTMB, StockDistFit, stockR, stocks, stokes, stopdetection, stopp, StormR, storr, stortingscrape, stoRy, stplanr, stpm, stpp, stppSim, stR, strand, strandCheckR, stratallo, stratamatch, Strategy, StrathE2E2, StratifiedMedicine, stratifyR, STREAK, stream, streamDAG, streamDepletr, stressor, strex, strider, stringb, stringfish, stringmagic, stringr, strip, stripless, stRoke, StrucDiv, 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susieR, susographql, sValues, svaNUMT, svaRetro, svDialogs, svDialogstcltk, svglite, svgtools, svGUI, svHttp, svKomodo, SVMDO, svMisc, svplots, svrep, svSocket, svUnit, svyVGAM, swag, swaRm, SWATH2stats, swdft, sweep, sweidnumbr, swephR, swfdr, swfscAirDAS, swfscDAS, SWIM, SwimmeR, swimplot, switchde, SWMPr, sylly, symbol.equation.gpt, SymbolicDeterminants, symengine, symmetry, symphony, symptomcheckR, synapsis, synapter, synaptome.data, synaptome.db, synergyfinder, SynExtend, synlet, synlik, SynMut, synr, syntenet, syntenyPlotteR, synthACS, synthesis, synthesisr, SynthETIC, SyScSelection, systemfit, systemfonts, systemPipeR, systemPipeRdata, systemPipeShiny, systemPipeTools, syuzhet, table.express, table.glue, tabledown, TableHC, tableHTML, tableMatrix, tableone, tablesgg, tablet, tablexlsx, tabnet, taboolaR, tabr, tabshiftr, tabula, TabulaMurisData, TabulaMurisSenisData, tabularaster, tabularmaps, tabulog, tabxplor, tacmagic, tactile, tadar, TADCompare, tagcloud, tagtools, taipan, tame, TANDEM, tanggle, TangledFeatures, tangram.pipe, TapeS, tapnet, TAPseq, tarchetypes, tardis, target, TargetDecoy, targeted, TargetSearch, tartare, tashu, taskscheduleR, tastypie, tatoo, taxadb, taxalight, TaxaNorm, taxlist, taxonbridge, taxonomizr, taylor, TaylorRussell, tayloRswift, TBFmultinomial, tbl2xts, tbm, tboot, TBRDist, tbrf, TBSignatureProfiler, TCA, TCGAbiolinksGUI.data, TCGAretriever, TCGAutils, tcgaViz, TCGAWorkflowData, TcGSA, TCHazaRds, TCIApathfinder, TCIU, tcl, Tcomp, tcpl, tcplfit2, TDApplied, TDAstats, tdata, tdaunif, TDAvec, TDbasedUFE, TDbasedUFEadv, TDCM, TDLM, tdsa, teal, teal.code, teal.data, teal.logger, teal.modules.clinical, teal.slice, teal.transform, teal.widgets, tealeaves, tectonicr, tehtuner, TEKRABber, telegram.bot, telemetR, tempdisagg, templateICAr, templates, Temporal, TempStable, Tendril, tensorEVD, TensorPreAve, TensorTest2D, tensr, TENxBrainData, TENxBUSData, TENxIO, TENxPBMCData, tenXplore, TENxVisiumData, tergm, terminaldigits, tern, tern.gee, tern.mmrm, Ternary, terrainr, terraTCGAdata, TesiproV, tessellation, tesseract, testarguments, testassay, testCompareR, testdat, TestDesign, TestDimorph, testDriveR, tester, TestFunctions, TestGenerator, testthat, testthis, TexExamRandomizer, texmex, texor, texreg, text, text.alignment, text2sdg, text2vec, textab, textBoxPlacement, textdata, TextForecast, textmineR, TextMiningGUI, textplot, textrank, textrecipes, textreg, textreuse, textshaping, textTinyR, TFactSR, tfaddons, tfarima, TFARM, TFBSTools, tfdatasets, tfdeploy, TFEA.ChIP, tfestimators, TFHAZ, tfhub, tfio, tfNeuralODE, tfprobability, tfrmt, tfruns, TFutils, tglkmeans, TGS, tgstat, tgver, TH.data, thaipdf, thames, theft, theiaR, thematic, TheOpenAIR, ThermalSampleR, thinkr, thor, ThreeArmedTrials, threesixtygiving, threshr, thunder, ThurMod, thurstonianIRT, tibble, tibbletime, tibblify, tidyAML, tidybayes, tidyBdE, tidybins, tidybulk, tidycat, tidyCDISC, tidyclust, tidycmprsk, tidycode, tidycomm, tidycwl, tidyDenovix, TidyDensity, tidydice, tidydr, tidyEmoji, tidyestimate, tidyfast, tidyfit, tidyfst, tidyft, tidygam, tidygapminder, tidygenomics, tidygeocoder, tidygeoRSS, tidyHeatmap, tidyheatmaps, tidyhte, tidyhydat, tidyindex, tidyjson, tidylda, tidylo, tidylog, tidyLPA, tidyMC, tidymodels, TidyMultiqc, tidymv, tidync, tidypaleo, tidyplate, tidypmc, tidyposterior, tidyquant, tidyqwi, tidyr, tidyREDCap, tidyrgee, tidyRSS, tidyrules, tidysdm, tidyselect, tidySEM, tidyseurat, tidySingleCellExperiment, tidysq, tidystats, tidystopwords, tidystringdist, tidySummarizedExperiment, tidytable, tidyterra, tidytext, tidytlg, tidytransit, tidytreatment, tidytree, tidyUSDA, tidyverse, tidyvpc, tidywikidatar, tidyxl, tigerstats, tigger, tigris, tiktokadsR, tikzDevice, TileDBArray, tilegramsR, tilemaps, tiler, timbeR, timechange, timecoursedata, timeLineGraphics, timeOmics, timeperiodsR, timeplyr, timeR, TimerQuant, timescape, timeSeq, timeseriesdb, timetk, TimiRGeN, TIN, tinkr, tinyarray, tinycodet, 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transfR, TransGraph, transite, transmem, transomics2cytoscape, TransPhylo, transplantr, transreg, TransTGGM, transx, traudem, traviz, trawl, TreatmentPatterns, treats, tree.interpreter, TreeAndLeaf, treebase, TreeBUGS, treeDA, treedata.table, treedater, treediff, TreeDimensionTest, TreeDist, treefit, treeheatr, treeio, treekoR, treemap, treemapify, treenomial, TreeSearch, TreeSimGM, treesliceR, treespace, treestartr, treestats, treestructure, TreeSummarizedExperiment, TreeTools, TREG, trekcolors, trelloR, tremendousr, TrenchR, trendchange, trending, Trendy, TRESS, TRexSelector, triact, TriadSim, TrialEmulation, trialr, triangle, tricycle, TriDimRegression, triebeard, tRigon, trimmer, trimr, trinROC, trip, triplot, tripr, TRMF, tRNA, tRNAdbImport, tRNAscanImport, tRnslate, TRONCO, troopdata, TropFishR, truh, TruncatedNormal, TruncExpFam, trustOptim, tryCatchLog, TSAR, tsbox, TSCAN, tscopula, TSCS, tsdataleaks, tsdf, TSE, TSEind, tseriesEntropy, tseriesTARMA, TSEwgt, tsfeatures, tsfgrnn, 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WaveSampling, waydown, waywiser, wbacon, wbstats, wcde, Wcompo, wconf, wCorr, wcox, wdman, wdnr.gis, wdpar, weakARMA, weathermetrics, webchem, WeberDivechaLCdata, webglobe, webmap, webr, webreadr, webSDM, webshot, websocket, wehoop, WeibullR.plotly, weibulltools, WeightedCluster, WeightedTreemaps, WeightIt, WeightSVM, weitrix, welo, WeMix, weyl, wgaim, WgtEff, WH, whatthreewords, wheatmap, when, whereami, whippr, whitebox, WhiteStripe, whitewater, whoa, whomds, whSample, widgetframe, widyr, wiesbaden, wiggleplotr, WikidataR, wikilake, WikipediR, wikitaxa, wildcard, wildlifeDI, wildmeta, wilson, winch, WindCurves, windsoraiR, winfapReader, wingen, WINS, withr, WLogit, womblR, WoodburyMatrix, WoodSimulatR, wooldridge, worcs, wordbankr, wordcloud2, wordler, wordpiece, wordpredictor, WordR, wordspace, workflows, workflowsets, workloopR, worldfootballR, WorldMapR, worldmet, WormTensor, worrms, worrrd, wosr, WOTPLY, woylier, wpa, wpm, wppi, wql, wqspt, wqtrends, WR, wrapr, wrassp, Wrench, WRestimates, wrGraph, WRI, wrMisc, WRS2, wrswoR, WRTDStidal, wrTopDownFrag, wsrf, wsyn, wTO, WufooR, wv, WVPlots, wwntests, wxgenR, wyz.code.metaTesting, wyz.code.offensiveProgramming, wyz.code.rdoc, wyz.code.testthat, x3ptools, xadmix, xaringanthemer, xcms, xcore, xcoredata, xesreadR, Xeva, xfun, xgb2sql, xgboost, xgxr, xhaz, XiMpLe, XINA, xlcutter, xlink, XLS, xlsx, xlsx2dfs, xml2, xmlr, xmpdf, xmrr, XNAString, xnet, XNomial, xpectr, xportr, xpose, XRJulia, xrnet, xtable, xtranat, xtune, xutils, yamlme, yamss, YAPSA, yardstick, yarn, yarrr, yatah, ycevo, yfR, ymlthis, YPBP, ypr, yyjsonr, zalpha, zctaCrosswalk, zeallot, zebrafishRNASeq, zebu, zeitgebr, zellkonverter, zen4R, zenith, zenplots, ZetaSuite, zFPKM, ZIBR, ZillowR, zinbwave, zipcodeR, zipR, ZIprop, ZLAvian, zlog, zmisc, zoid, zoltr, zonebuilder, zonohedra, zoolog, zoomerjoin, zoomGroupStats, zscorer, ztable, ztpln, ZygosityPredictor, zzlite
Reverse enhances: collapsibleTree, htmltools, kimisc, networkD3, patchSynctex, svgPanZoom, this.path, threejs, tinytable

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