plantecowrap: Enhancing Capabilities of 'plantecophys'

Provides wrapping functions to add to capabilities to 'plantecophys' (Duursma, 2015, <doi:10.1371/journal.pone.0143346>). Key added capabilities include temperature responses of mesophyll conductance (gm, gmeso), apparent Michaelis-Menten constant for rubisco carboxylation in air (Km, Kcair),and photorespiratory CO2 compensation point (GammaStar) for fitting A-Ci or A-Cc curves for C3 plants (for temperature responses of gm, Km, & GammaStar, see Bernacchi et al., 2002, <doi:10.1104/pp.008250>; for theory on fitting A-Ci or A-Cc curves, see Farquhar et al., 1980; <doi:10.1007/BF00386231>, von Caemmerer, 2000, ISBN:064306379X; Ethier & Livingston, 2004 <doi:10.1111/j.1365-3040.2004.01140.x>; and Gu et al., 2010, <doi:10.1111/j.1365-3040.2010.02192.x>). Includes the ability to fit the Arrhenius and modified Arrhenius temperature response functions (see Medlyn et al., 2002, <doi:10.1046/j.1365-3040.2002.00891.x>) for maximum rubisco carboxylation rates (Vcmax) and maximum electron transport rates (Jmax) (see Farquhar et al., 1980; <doi:10.1007/BF00386231>).

Version: 1.0.4
Depends: R (≥ 3.5.0), ggplot2 (≥ 3.2.1), minpack.lm (≥ 1.2-1), plantecophys (≥ 1.4-4), tidyr (≥ 1.0.0)
Suggests: knitr, rmarkdown, testthat
Published: 2020-04-03
Author: Joseph Stinziano ORCID iD [aut, cre], Demi Gamble [aut], Robert Sharwood [aut], Warren Conaty [aut]
Maintainer: Joseph Stinziano <josephstinziano at gmail.com>
BugReports: https://github.com/jstinzi/plantecowrap/issues
License: MIT + file LICENSE
URL: https://github.com/jstinzi/plantecowrap
NeedsCompilation: no
CRAN checks: plantecowrap results

Documentation:

Reference manual: plantecowrap.pdf
Vignettes: Example_dataset_creation
Using_plantecophystools

Downloads:

Package source: plantecowrap_1.0.4.tar.gz
Windows binaries: r-devel: plantecowrap_1.0.4.zip, r-release: plantecowrap_1.0.4.zip, r-oldrel: plantecowrap_1.0.4.zip
macOS binaries: r-release (arm64): plantecowrap_1.0.4.tgz, r-release (x86_64): plantecowrap_1.0.4.tgz, r-oldrel: plantecowrap_1.0.4.tgz

Linking:

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